PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009791610.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 235aa    MW: 26112.7 Da    PI: 4.7718
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009791610.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.92.1e-1771121155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+G+r++  +++Wv+e+r+p   +k+ r++lg+f tae+Aa+a++ a+ +l+g
  XP_009791610.1  71 PVYRGIRRRN-SNKWVCEVREP---NKKSRIWLGTFPTAEMAARAHDVAAIALKG 121
                     68*****888.8******9998...347***********************9988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.1E-1271121IPR001471AP2/ERF domain
PROSITE profilePS5103221.7272129IPR001471AP2/ERF domain
SMARTSM003805.8E-2872135IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.8E-3172131IPR001471AP2/ERF domain
SuperFamilySSF541712.48E-2072131IPR016177DNA-binding domain
PRINTSPR003673.3E-87384IPR001471AP2/ERF domain
CDDcd000182.51E-3073131No hitNo description
PRINTSPR003673.3E-895111IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MDIFGNYNFD PLIPTLSTSL LPAEVLPESS TSSDNGSCSG TPNYFDEEVM LASNYPKKRA  60
GRKKFRETRH PVYRGIRRRN SNKWVCEVRE PNKKSRIWLG TFPTAEMAAR AHDVAAIALK  120
GRSACLNFAD SAWRLPIPAS AAAKDIQKAA AEAAEAFRPL ESDIENSREI IIDLVIQEVV  180
AELPDNVLFL DEEALFYMPG LLANMAEGLM LPPPQCIIDG YGMEADHADM SLWSY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU7271580.0EU727158.1 Nicotiana tabacum DREB4 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009791610.11e-175PREDICTED: dehydration-responsive element-binding protein 1A-like
SwissprotQ9M0L05e-76DRE1A_ARATH; Dehydration-responsive element-binding protein 1A
TrEMBLB3VBE21e-141B3VBE2_TOBAC; DREB4
STRINGPGSC0003DMT4000371229e-97(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26324183
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.16e-70dehydration response element B1A